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为了提供更一致的接口,igraph 中使用点式命名的函数,例如 add.edges(),将被弃用,取而代之的是使用蛇式命名的函数,例如 add_edges()

目前,对于每个函数,两种方式都可以工作,但我们将逐步删除点式命名函数,首先在使用它们时发出弃用消息,然后在后续版本中发出警告,直到它们实际导致错误。

因此,我们希望您更新您的代码库,无论是软件包还是脚本。 感谢您的合作! 如有任何问题,请在 igraph 问题跟踪器 中向我们提出。

旧名称 新名称
add.edges igraph::add_edges
add.vertex.shape igraph::add_shape
add.vertices igraph::add_vertices
adjacent.triangles igraph::count_triangles
articulation.points igraph::articulation_points
aging.prefatt.game igraph::sample_pa_age
aging.ba.game igraph::sample_pa_age
aging.barabasi.game igraph::sample_pa_age
alpha.centrality igraph::alpha_centrality
are.connected igraph::are_adjacent
assortativity.degree igraph::assortativity_degree
assortativity.nominal igraph::assortativity_nominal
asymmetric.preference.game igraph::sample_asym_pref
authority.score igraph::authority_score
automorphisms igraph::count_automorphisms
autocurve.edges igraph::curve_multiple
average.path.length igraph::mean_distance
ba.game igraph::sample_pa
barabasi.game igraph::sample_pa
biconnected.components igraph::biconnected_components
bipartite.mapping igraph::bipartite_mapping
bipartite.projection igraph::bipartite_projection
bipartite.projection.size igraph::bipartite_projection_size
bipartite.random.game igraph::sample_bipartite
blockGraphs igraph::graphs_from_cohesive_blocks
bonpow igraph::power_centrality
callaway.traits.game igraph::sample_traits_callaway
canonical.permutation igraph::canonical_permutation
centralization.betweenness igraph::centr_betw
centralization.betweenness.tmax igraph::centr_betw_tmax
centralization.closeness igraph::centr_clo
centralization.closeness.tmax igraph::centr_clo_tmax
centralization.degree igraph::centr_degree
centralization.degree.tmax igraph::centr_degree_tmax
centralization.evcent igraph::centr_eigen
centralization.evcent.tmax igraph::centr_eigen_tmax
centralize.scores igraph::centralize
cited.type.game igraph::sample_cit_types
citing.cited.type.game igraph::sample_cit_cit_types
clique.number igraph::clique_num
cluster.distribution igraph::component_distribution
clusters igraph::components
code.length igraph::code_len
cohesive.blocks igraph::cohesive_blocks
connect.neighborhood igraph::connect
contract.vertices igraph::contract
convex.hull igraph::convex_hull
count.multiple igraph::count_multiple
cutat igraph::cut_at
decompose.graph igraph::decompose
degree.distribution igraph::degree_distribution
degree.sequence.game igraph::sample_degseq
delete.edges igraph::delete_edges
delete.vertices igraph::delete_vertices
dendPlot igraph::plot_dendrogram
dominator.tree igraph::dominator_tree
dyad.census igraph::dyad_census
edge.betweenness igraph::edge_betweenness
edge.betweenness.community igraph::cluster_edge_betweenness
edge.connectivity igraph::edge_connectivity
edge.disjoint.paths igraph::edge_connectivity
establishment.game igraph::sample_traits
evcent igraph::eigen_centrality
farthest.nodes igraph::farthest_vertices
fastgreedy.community igraph::cluster_fast_greedy
forest.fire.game igraph::sample_forestfire
get.adjedgelist igraph::as_adj_edge_list
get.adjlist igraph::as_adj_list
get.adjacency igraph::as_adjacency_matrix
get.data.frame igraph::as_data_frame
get.edge.attribute igraph::edge_attr
get.edgelist igraph::as_edgelist
get.graph.attribute igraph::graph_attr
get.incidence igraph::as_biadjacency_matrix
get.stochastic igraph::stochastic_matrix
get.vertex.attribute igraph::vertex_attr
graph.adhesion igraph::adhesion
graph.adjacency igraph::graph_from_adjacency_matrix
graph.adjlist igraph::graph_from_adj_list
graph.atlas igraph::graph_from_atlas
graph.automorphisms igraph::count_automorphisms
graph.bfs igraph::bfs
graph.bipartite igraph::make_bipartite_graph
graph.cohesion igraph::cohesion
graph.complementer igraph::complementer
graph.compose igraph::compose
graph.coreness igraph::coreness
graph.data.frame igraph::graph_from_data_frame
graph.de.bruijn igraph::make_de_bruijn_graph
graph.density igraph::edge_density
graph.disjoint.union igraph::disjoint_union
graph.dfs igraph::dfs
graph.difference igraph::difference
graph.diversity igraph::diversity
graph.edgelist igraph::graph_from_edgelist
graph.eigen igraph::spectrum
graph.empty igraph::make_empty_graph
graph.extended.chordal.ring igraph::make_chordal_ring
graph.formula igraph::graph_from_literal
graph.full igraph::make_full_graph
graph.full.bipartite igraph::make_full_bipartite_graph
graph.full.citation igraph::make_full_citation_graph
graph.graphdb igraph::graph_from_graphdb
graph.incidence igraph::graph_from_biadjacency_matrix
graph.isocreate igraph::graph_from_isomorphism_class
graph.kautz igraph::make_kautz_graph
graph.knn igraph::knn
graph.laplacian igraph::laplacian_matrix
graph.lattice igraph::make_lattice
graph.lcf igraph::graph_from_lcf
graph.maxflow igraph::max_flow
graph.mincut igraph::min_cut
graph.motifs igraph::motifs
graph.motifs.est igraph::sample_motifs
graph.motifs.no igraph::count_motifs
graph.neighborhood igraph::make_ego_graph
graph.star igraph::make_star
graph.strength igraph::strength
graph.tree igraph::make_tree
graph.union igraph::union.igraph
graph.ring igraph::make_ring
graphlets.candidate.basis igraph::graphlet_basis
graphlets.project igraph::graphlet_proj
growing.random.game igraph::sample_growing
grg.game igraph::sample_grg
has.multiple igraph::any_multiple
hrg.consensus igraph::consensus_tree
hrg.create igraph::hrg
hrg.dendrogram igraph::hrg_tree
hrg.game igraph::sample_hrg
hrg.fit igraph::fit_hrg
hrg.predict igraph::predict_edges
hub.score igraph::hub_score
igraph.console igraph::console
igraph.sample igraph::sample_seq
igraph.version igraph::igraph_version
igraphdemo igraph::igraph_demo
igraphtest igraph::igraph_test
independence.number igraph::ivs_size
independent.vertex.sets igraph::ivs
infomap.community igraph::cluster_infomap
induced.subgraph igraph::induced_subgraph
interconnected.islands.game igraph::sample_islands
is.bipartite igraph::is_bipartite
is.chordal igraph::is_chordal
is.connected igraph::is_connected
is.dag igraph::is_dag
is.degree.sequence igraph::is_degseq
is.directed igraph::is_directed
is.graphical.degree.sequence igraph::is_graphical
is.hierarchical igraph::is_hierarchical
is.igraph igraph::is_igraph
is.loop igraph::which_loop
is.matching igraph::is_matching
is.maximal.matching igraph::is_max_matching
is.minimal.separator igraph::is_min_separator
is.multiple igraph::which_multiple
is.mutual igraph::which_mutual
is.named igraph::is_named
is.separator igraph::is_separator
is.simple igraph::is_simple
is.weighted igraph::is_weighted
k.regular.game igraph::sample_k_regular
label.propagation.community igraph::cluster_label_prop
largest.cliques igraph::largest_cliques
largest.independent.vertex.sets igraph::largest_ivs
lastcit.game igraph::sample_last_cit
layout.auto igraph::layout_nicely
layout.bipartite igraph::layout_as_bipartite
layout.davidson.harel igraph::layout_with_dh
layout.drl igraph::layout_with_drl
layout.gem igraph::layout_with_gem
layout.graphopt igraph::layout_with_graphopt
layout.grid igraph::layout_on_grid
layout.mds igraph::layout_with_mds
layout.merge igraph::merge_coords
layout.norm igraph::norm_coords
layout.star igraph::layout_as_star
layout.sugiyama igraph::layout_with_sugiyama
leading.eigenvector.community igraph::cluster_leading_eigen
line.graph igraph::make_line_graph
list.edge.attributes igraph::edge_attr_names
list.graph.attributes igraph::graph_attr_names
list.vertex.attributes igraph::vertex_attr_names
maxcohesion igraph::max_cohesion
maximal.cliques igraph::max_cliques
maximal.cliques.count igraph::count_max_cliques
maximal.independent.vertex.sets igraph::max_ivs
minimal.st.separators igraph::min_st_separators
maximum.bipartite.matching igraph::max_bipartite_match
maximum.cardinality.search igraph::max_cardinality
minimum.size.separators igraph::min_separators
minimum.spanning.tree igraph::mst
mod.matrix igraph::modularity_matrix
multilevel.community igraph::cluster_louvain
neighborhood.size igraph::ego_size
no.clusters igraph::count_components
optimal.community igraph::cluster_optimal
page.rank igraph::page_rank
path.length.hist igraph::distance_table
permute.vertices igraph::permute
piecewise.layout igraph::layout_components
plotHierarchy igraph::plot_hierarchy
power.law.fit igraph::fit_power_law
preference.game igraph::sample_pref
read.graph igraph::read_graph
remove.edge.attribute igraph::delete_edge_attr
remove.graph.attribute igraph::delete_graph_attr
remove.vertex.attribute igraph::delete_vertex_attr
running.mean igraph::running_mean
sbm.game igraph::sample_sbm
set.edge.attribute igraph::set_edge_attr
set.graph.attribute igraph::set_graph_attr
set.vertex.attribute igraph::set_vertex_attr
shortest.paths igraph::distances
showtrace igraph::show_trace
spinglass.community igraph::cluster_spinglass
stCuts igraph::st_cuts
stMincuts igraph::st_min_cuts
static.fitness.game igraph::sample_fitness
static.power.law.game igraph::sample_fitness_pl
subgraph.centrality igraph::subgraph_centrality
tkplot.canvas igraph::tk_canvas
tkplot.center igraph::tk_center
tkplot.close igraph::tk_close
tkplot.export.postscript igraph::tk_postscript
tkplot.fit.to.screen igraph::tk_fit
tkplot.getcoords igraph::tk_coords
tkplot.off igraph::tk_off
tkplot.reshape igraph::tk_reshape
tkplot.rotate igraph::tk_rotate
tkplot.setcoords igraph::tk_set_coords
topological.sort igraph::topo_sort
triad.census igraph::triad_census
unfold.tree igraph::unfold_tree
vertex.connectivity igraph::vertex_connectivity
vertex.disjoint.paths igraph::vertex_disjoint_paths
walktrap.community igraph::cluster_walktrap
watts.strogatz.game igraph::sample_smallworld
write.graph igraph::write_graph
graph.famous igraph::make_graph
igraph.from.graphNEL igraph::graph_from_graphnel
igraph.to.graphNEL igraph::as_graphnel
getIgraphOpt igraph::igraph_opt
igraph.options igraph::igraph_options
graph.intersection igraph::intersection
exportPajek igraph::export_pajek
get.diameter igraph::get_diameter
get.all.shortest.paths igraph::all_shortest_paths
get.shortest.paths igraph::shortest_paths
graph igraph::make_graph
vertex.shapes igraph::shapes
igraph.shape.noclip igraph::shape_noclip
igraph.shape.noplot igraph::shape_noplot
create.communities igraph::make_clusters